PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74199.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family B3
Protein Properties Length: 279aa    MW: 32107.4 Da    PI: 9.9558
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.62.4e-18211011399
                 TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 s rl++p  f++++ +++ +    +l+ ++g  W v+l    +++ ++l++GWk+Fv+++ Lke  f++F+++g+  f  +v++f+k
  RWR74199.1  21 SERLRIPPAFVKDNVIDPSQ--RAQLKGPNGSIWYVQL--GTRGKDIYLQDGWKKFVEDHSLKETHFLLFRFEGNGVF--TVQIFDK 101
                 568***********888766..6***************..888889*************************9998888..*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MLGASCESSP HFYKVLLGDF SERLRIPPAF VKDNVIDPSQ RAQLKGPNGS IWYVQLGTRG  60
KDIYLQDGWK KFVEDHSLKE THFLLFRFEG NGVFTVQIFD KTGCEIKEII TCNTSKKFIL  120
RSDEKKVGSP KTTLSDDFEQ HSQHKLHGRS DMKKPKNEYV HSLQTSQSNK TGSTQRKHMP  180
TFKINQSKKI KTEGGELTMS KTFSYSTGNR HISKKWPSTT TEERTKAFDN ANAFSKSSEV  240
PKFFKNYEKI WCDLWICVGH TDLLYEEISS KRKSINFPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-15B3 family protein