PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74113.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 415aa    MW: 44592.6 Da    PI: 9.8998
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.11.1e-09146174129
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                      r+rWT+eEd  l+ av++ G g+W+ I +
       RWR74113.1 146 RKRWTPEEDMELIAAVQKCGEGNWANILK 174
                      89************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MFETKKKKRK VFIREDDIPM TLRRYSATTL LTLLQEVAQF PGVKIDWNLL VKKTSTGISN  60
AREYQMVWRH LAYRDILLEK LEEGDEPFDD DSDLEVELEP SPAVNGEAMT EAAACVKKQP  120
LPSVPSLEGL EGNGSASGNL QQRKRRKRWT PEEDMELIAA VQKCGEGNWA NILKGDFKHD  180
RSASQLSQRW SIIRKNKANL TTSIVSNSTG GALTEAQLAA RQAVSMALNM PMKGSLLATS  240
SVGQDAFFYS PNFIYHLGVH SVAAAANLSS TNGNSSTAPA AASDASLLYT PLSEVSTKAP  300
VTSSPQILQQ CQQAPSQTPL PKVASSSNPA PPKPRPTSKR LSAPAKNLPT GPNPLIQAAA  360
VAAGARIATP STAASLFKAA QSRNAVHIRQ GGSVPQSSMP VTQTIGHQHH DIPAT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1510KKKKRK
2611KKKRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.23e-67MYB_related family protein