PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73929.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

GRF

Protein Properties

Length: 592aa MW: 63753.1 Da PI: 7.8604

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.7e-24	221	265	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e RWR73929.1 221 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEG 265 79****************************************985 PP
2	QLQ	63	8e-22	151	187	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKyL an+P+P +Ll +i+k RWR73929.1 151 GPFTPSQWMELEHQALIYKYLTANAPIPTNLLIPIRK 187 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MDLGVLGLDG LVGSEGGFGP FFSEAETREK WGGSGVSKQG RSGLVEDDWR MSKVAKTDDF 60 GVSKAMLMQS KNPSTLRSAS MFSDGQQQLL LSFSSPKPDG VIGSDGFVER SYQNTVLPCY 120 HSTSAYGRNA GLGSGSLNEN MHCGALTGVR GPFTPSQWME LEHQALIYKY LTANAPIPTN 180 LLIPIRKSLC PTGFSGFSAG SLRPNSLGWG SFHLGFSGNT DPEPGRCRRT DGKKWRCSRD 240 AVADQKYCER HMNRGRHRSR KPVEGQTGHA STGTATAAKA MPAIASAAAA SPVPGCGTSN 300 SLTIAQQQLK SLQPGVDTSS THVSRMLMNK MNVGDHMQDS QSLSILSSVD KKSKDAPFVI 360 PKQHLSLEET SRSEFGLVPS DSLTNPHRSS YELNDQESQS HPLRHFIDNW PKSPSDRSAI 420 TWPEVEKIQS DRTQLSISIP VASSDFSSST SSPTQERVTL SPLKLSRELD PIQMGLGVGG 480 VHESTQRQAN WIPISWESSM GGPLGEVLKN TNNSQRDHKN SSSVLNLMTE GWDASPQIGS 540 SPTGVLQKTF GSFSNSSTGS SPRTEVNKTH DHTSLCDDLL GSTLVNSTVP SM

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MDLGVLGLDG LVGSEGGFGP FFSEAETREK WGGSGVSKQG RSGLVEDDWR MSKVAKTDDF  60
GVSKAMLMQS KNPSTLRSAS MFSDGQQQLL LSFSSPKPDG VIGSDGFVER SYQNTVLPCY  120
HSTSAYGRNA GLGSGSLNEN MHCGALTGVR GPFTPSQWME LEHQALIYKY LTANAPIPTN  180
LLIPIRKSLC PTGFSGFSAG SLRPNSLGWG SFHLGFSGNT DPEPGRCRRT DGKKWRCSRD  240
AVADQKYCER HMNRGRHRSR KPVEGQTGHA STGTATAAKA MPAIASAAAA SPVPGCGTSN  300
SLTIAQQQLK SLQPGVDTSS THVSRMLMNK MNVGDHMQDS QSLSILSSVD KKSKDAPFVI  360
PKQHLSLEET SRSEFGLVPS DSLTNPHRSS YELNDQESQS HPLRHFIDNW PKSPSDRSAI  420
TWPEVEKIQS DRTQLSISIP VASSDFSSST SSPTQERVTL SPLKLSRELD PIQMGLGVGG  480
VHESTQRQAN WIPISWESSM GGPLGEVLKN TNNSQRDHKN SSSVLNLMTE GWDASPQIGS  540
SPTGVLQKTF GSFSNSSTGS SPRTEVNKTH DHTSLCDDLL GSTLVNSTVP SM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	2e-92	GRF family protein