PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73726.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 308aa MW: 33772 Da PI: 6.0423

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	25	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd+ll ++++ G g+W+t +++ g+ R++k+c++rw +yl RWR73726.1 25 RGPWTPEEDQLLSSYIAREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 72 89****************************99**********97 PP
2	Myb_DNA-binding	47.1	5.6e-15	83	123	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWR73726.1 83 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 123 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MRSPTSATPK ANKTTPCCLK VGLKRGPWTP EEDQLLSSYI AREGEGRWRT LPKRAGLLRC 60 GKSCRLRWMN YLRPSVKRGQ IAPDEEDLIL RLHRLLGNRW SLIAGRIPGR TDNEIKNYWN 120 THLSKKLISM GIDPRTHKPL DPSPNPKSTP HAAPPPPAPN PNPSSSSLEE SGGLGDLNGT 180 NMINPNFSNK YMEGPSQIIG SDTHDYWQNS DGITMLMGLQ DSRVSVNNGD EICGSDDVLS 240 SFLNELMDED MFLKQQQQNT CATSDSLLPS LPGLGCGGAS DWNAEVPSQV GVDGEECSQF 300 ADQVGNCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	4e-81	MYB family protein