PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73585.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 616aa MW: 68816.4 Da PI: 6.242

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73585.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	7e-09	538	576	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA++ gLt +qV++WF N R + RWR73585.1 538 MFQNflHPYPKDAEKHVLAMQSGLTRNQVSNWFINARVR 576 6887779******************************88 PP
2	BELL	66.7	4.5e-22	413	480	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 el kkk Ll +l+ Vd+rY+ + +q+q+v ssF+++++ ++ ++++++A +++S ++ L+++i++qi RWR73585.1 413 ELDKKKPELLAMLQVVDNRYEECLNQVQAVTSSFHVATESNP-RLHARFAVQTLSVLYKKLRERITSQI 480 899*************************************.***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MENDIFNASL PIANQNSMVI DSMSSQIFPG SFVPPDELDH NSQRPLIAGY SLFSTLQADT 60 MHNLHITNHG GMGNGETLVS DNIQFSKHTI KNTAVSSSVA NTNLQENFMG ASLPASSIAN 120 LLVASTSLQE NLIGVPISAA SRLQFEDMRS LMSNDSCNIS NQSLSTTGNC VYDGSQGGMG 180 FLASKKDSDL NYEEILGRRA SFGKTPLNAV CPSYHVTGNS LSTWISDKSN TPNEPYGYCM 240 PNNELSLSLA TCAPSLVDMP TIPDQCSEIR CSGVTQATSK ENRYADTREL QNCLTLPPYS 300 FQTVGLESEQ TSTKELSLDF GSFKQAQFLR VLLESKYLHA AQKILAEFAS YSLENQESLY 360 NSPDGIQNDA NASFSSSCSG ERGILMMSSG EFPFSDGEIK PQDHKKKMLQ IPELDKKKPE 420 LLAMLQVVDN RYEECLNQVQ AVTSSFHVAT ESNPRLHARF AVQTLSVLYK KLRERITSQI 480 LLAGERCGSE CMQEKEELFE SSFQKQWALQ QLRRNDLHPW RPQRGLPEKS VSVLRAWMFQ 540 NFLHPYPKDA EKHVLAMQSG LTRNQVSNWF INARVRLWKP MIEEMYSEMN KKGRQEGATT 600 DRRNHGINSH QNIWRS

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MENDIFNASL PIANQNSMVI DSMSSQIFPG SFVPPDELDH NSQRPLIAGY SLFSTLQADT  60
MHNLHITNHG GMGNGETLVS DNIQFSKHTI KNTAVSSSVA NTNLQENFMG ASLPASSIAN  120
LLVASTSLQE NLIGVPISAA SRLQFEDMRS LMSNDSCNIS NQSLSTTGNC VYDGSQGGMG  180
FLASKKDSDL NYEEILGRRA SFGKTPLNAV CPSYHVTGNS LSTWISDKSN TPNEPYGYCM  240
PNNELSLSLA TCAPSLVDMP TIPDQCSEIR CSGVTQATSK ENRYADTREL QNCLTLPPYS  300
FQTVGLESEQ TSTKELSLDF GSFKQAQFLR VLLESKYLHA AQKILAEFAS YSLENQESLY  360
NSPDGIQNDA NASFSSSCSG ERGILMMSSG EFPFSDGEIK PQDHKKKMLQ IPELDKKKPE  420
LLAMLQVVDN RYEECLNQVQ AVTSSFHVAT ESNPRLHARF AVQTLSVLYK KLRERITSQI  480
LLAGERCGSE CMQEKEELFE SSFQKQWALQ QLRRNDLHPW RPQRGLPEKS VSVLRAWMFQ  540
NFLHPYPKDA EKHVLAMQSG LTRNQVSNWF INARVRLWKP MIEEMYSEMN KKGRQEGATT  600
DRRNHGINSH QNIWRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	2e-83	TALE family protein