PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73572.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 273aa MW: 30334.8 Da PI: 7.5287

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.7	2e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+ +v+++G+g +W + +++ g++R++k+c++rw++yl RWR73572.1 14 RGPWSPEEDIALKSYVERHGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	45.1	2.4e-14	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd +++++ +G++ W+ Ia++++ gRt++++k++w++ RWR73572.1 69 GGFTEEEDNIIYNLYGTMGSR-WSVIASHLP-GRTDNDVKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MGRAPCCDKA KVKRGPWSPE EDIALKSYVE RHGTGGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDNIIY NLYGTMGSRW SVIASHLPGR TDNDVKNYWN TKLKKKFLVT 120 KSNLTTNANT IANDHSQLSS SPSPHVIKTE SCTNGFWPPL RENSTSLPSI DIGFGYNVEP 180 QRSFADPISF PLPVLKESSD YGVIANSYDA SSSSLPMDNS YYSQWPSSGS DDVDGFILDH 240 AYGSPYELLN SYGFQTVASS ETKPQGLFQG VTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	5e-75	MYB family protein