PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73466.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 389aa    MW: 44071 Da    PI: 5.2375
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.21e-06209249853
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                  Er+RR+r+ + +  Lr l+P+      +K++K ++L  A  Y++s
  RWR73466.1 209 SERNRRKRLSQQLLALRALVPNI-----TKMDKRSVLVDALAYLSS 249
                 6*********************7.....6**************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MPAGLGSSTS TAFAGQKRHS RKKEIRTEPY THEFHDPDPR HHVLLAQPDD IHIPTFLDEF  60
PDFTLQNDQL FNFPTSNDQN NPLPLHPLPN YTNESLLFDD FETDIDMLNT MQPQVCMSAG  120
SVTETALTPI EGNESNQCIN CDAWLVEPPE ESYEEPIFGS AVSADTAEMF VNSAAKRSML  180
SRSEEMGDNE EDTDEERRTI TSSCKNLVSE RNRRKRLSQQ LLALRALVPN ITKMDKRSVL  240
VDALAYLSSI HEEIERIKKE ELKHIHNSYV QAPTNTTLQP QRMIESQTQK PKPRPKSQIL  300
EIDAEKMEDR RFVVKITCKG SSDAGGEVLR IIESLGVEIT YTALDKIKPM LVLVTIFIRM  360
RKQGKMTEEK LKDCITSTAL KSGLLLKNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29930.28e-07bHLH family protein