PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR73251.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Protein Properties

Length: 356aa MW: 40327 Da PI: 10.1823

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR73251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.8	8.5e-18	21	101	13	99
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + rl++p f+e++ +++ e +++ +sg W v+l + +++ ++l++GWk+Fv+++ Lk f++F ++g+ f +v++f+k RWR73251.1 21 LERLRIPPAFVEHNVIDPSE--RAQIKGPSGSIWYVQL--SVRGKDIYLQDGWKKFVEDHSLKHSNFLLFGYEGNGLF--TVQIFDK 101 468******999888766..59999*******..888888**********************997777..**998 PP
2	B3	57	3.4e-18	240	333	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 f+k++ + + ++g+l +p f++++ k +++ ++l d++gr Wev++ +k++ +++GW F + n+Lke D+++F+l+g+ + ++v++f RWR73251.1 240 FLKIM-RRSGVTRGMLGIPTYFMRKYLPK--RNTSISLIDPTGRPWEVNFVRhlCKRG--GSFSGGWPAFSHGNNLKEEDVCMFELVGECR--MRVHIF 331 66777.555566678*********533..5668***********76344444..5599******************99444..6999 PP -S CS B3 98 rk 99 r+ RWR73251.1 332 RS 333 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MSGGNCKSSP HFFKILLGDF LERLRIPPAF VEHNVIDPSE RAQIKGPSGS IWYVQLSVRG 60 KDIYLQDGWK KFVEDHSLKH SNFLLFGYEG NGLFTVQIFD KTGCNIEEII TCNTSKKSIL 120 ISGEKKGGSP ETTLADDFEQ HSQHKLHGSD MKNPQNDSLH SLQTSQSNKT DSTQRQHMPT 180 FKINQFKKIK TDGVELTMSK TCSYSKGNQH ISKKQSSAEE KTKAFDNANA FSRSSKLPNF 240 LKIMRRSGVT RGMLGIPTYF MRKYLPKRNT SISLIDPTGR PWEVNFVRHL CKRGGSFSGG 300 WPAFSHGNNL KEEDVCMFEL VGECRMRVHI FRSEMPPPTL VKSSEKTKPL KRASHF

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MSGGNCKSSP HFFKILLGDF LERLRIPPAF VEHNVIDPSE RAQIKGPSGS IWYVQLSVRG  60
KDIYLQDGWK KFVEDHSLKH SNFLLFGYEG NGLFTVQIFD KTGCNIEEII TCNTSKKSIL  120
ISGEKKGGSP ETTLADDFEQ HSQHKLHGSD MKNPQNDSLH SLQTSQSNKT DSTQRQHMPT  180
FKINQFKKIK TDGVELTMSK TCSYSKGNQH ISKKQSSAEE KTKAFDNANA FSRSSKLPNF  240
LKIMRRSGVT RGMLGIPTYF MRKYLPKRNT SISLIDPTGR PWEVNFVRHL CKRGGSFSGG  300
WPAFSHGNNL KEEDVCMFEL VGECRMRVHI FRSEMPPPTL VKSSEKTKPL KRASHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	3e-24	B3 family protein