PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73143.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 117aa    MW: 13368.2 Da    PI: 9.6371
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.64.5e-164390148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l ++  + G g+W+ +ar  g+ R++k+c++rw +yl
       RWR73143.1 43 KGLWSPEEDEKLMNYMLMNGQGCWSDVARNAGLQRCGKSCRLRWINYL 90
                     678*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MPPFLYQTSW KSGTCTGLPS HSQVGMKNPD HNGNDSNKKK LRKGLWSPEE DEKLMNYMLM  60
NGQGCWSDVA RNAGLQRCGK SCRLRWINYL RPDLKRGAFS SQEEDLIIQL HSILGNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.12e-48MYB family protein