PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73097.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 727aa    MW: 82047.6 Da    PI: 7.5972
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS408.27.6e-1253627261374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal..ppsetseknsseelaalklfsevsPilkfshlt 97 
                 lv+lLl cAeav+++d   a+++L++l++ ++p gd+m R+a+yft +La+rl+ s ++  +    ++    ++n +e l+++++ ++++P+ kf+h+t
  RWR73097.1 362 LVHLLLVCAEAVAKNDYMSAKRFLQQLNQVVTPLGDSMLRVASYFTVGLATRLTASLNSNPNNHtpKSLVPFPQNCVEILKIYQIQYQAFPYAKFAHFT 460
                 68****************************************************965554433311233333566************************ PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 aNqaI ea++ge+rvH+i +di qG QWpa++qaLa+Rp+gpp lRiTgvg     s e ++etg+ L+++A++l+vpfef++ v ++l dl++++++ 
  RWR73097.1 461 ANQAIFEAFQGEDRVHVIYLDIIQGYQWPAFMQALAARPGGPPFLRITGVGT----SLEFVRETGRHLTDLARSLHVPFEFHP-VGEHLGDLQPHMFHR 554
                 ****************************************************....9**************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 + gEalaVn+  +l r+        ++  ++++++++  Pk++++veq+a++n++ Fl rfleal+yysa+fdslea++p++s er+kvE++++g +i+
  RWR73097.1 555 RVGEALAVNCFNRLNRVS------GNRLGNLVSMIRNQAPKILTLVEQDASLNGHHFLGRFLEALHYYSAIFDSLEATFPADSPERAKVEEHIIGVKIR 647
                 *****************7......444557********************************************************************* PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 n+vaceg  r erhe+le+Wr+ +e  GFk +plse+a++q k+ll  ++ dgyr+ +++g+l+lgW+dr+L+++SaWr
  RWR73097.1 648 NIVACEGLYRLERHERLETWRKIMEGKGFKGLPLSENAVAQSKMLLGLYPCDGYRIIQDRGCLILGWQDRALFAASAWR 726
                 ******************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 727 aa     Download sequence    
MGPVNTENPF SKPQSPLLTA SMSESNNIST SEFNHKYHGN PLGKFEDLKF EVDVEVQSPD  60
ISELESLFFD QLDFGTTNFM ISSPRRDFMI FSPRRDFMVY SPKRDFMNSS PNRDFMVSSP  120
KRDFMSSSPK RDFMVTSPKR DLMVSSPERN SMNSSPIRDF MASPPRRDFF ISSPKQEFMV  180
SSPKRTLLPH SSYTLAEAGV HGPRCNQSLL GCCSQYWSNT VQMGACSTSH KGKPQIPLHK  240
VLFNSTQFVQ TESLPLPTMD GFLDDHLGDD FGMYPNPTMK MPDSGRCGPE SLDTAAAAFP  300
GMFDCLPLRN LRNFGLTSDE GCLTQERDVY QMSSFAASPK LLRQQKHLQK NIEQEQDSGI  360
QLVHLLLVCA EAVAKNDYMS AKRFLQQLNQ VVTPLGDSML RVASYFTVGL ATRLTASLNS  420
NPNNHTPKSL VPFPQNCVEI LKIYQIQYQA FPYAKFAHFT ANQAIFEAFQ GEDRVHVIYL  480
DIIQGYQWPA FMQALAARPG GPPFLRITGV GTSLEFVRET GRHLTDLARS LHVPFEFHPV  540
GEHLGDLQPH MFHRRVGEAL AVNCFNRLNR VSGNRLGNLV SMIRNQAPKI LTLVEQDASL  600
NGHHFLGRFL EALHYYSAIF DSLEATFPAD SPERAKVEEH IIGVKIRNIV ACEGLYRLER  660
HERLETWRKI MEGKGFKGLP LSENAVAQSK MLLGLYPCDG YRIIQDRGCL ILGWQDRALF  720
AASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-95GRAS family protein