PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72982.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 394aa    MW: 43697.7 Da    PI: 7.5641
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.51.5e-15210256455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn+ ErrRRdriN+++  L +l+P++      K +K+++L +++eY+k+Lq
  RWR72982.1 210 VHNQSERRRRDRINQKMKALMKLVPNS-----SKTDKVSMLDEVIEYLKQLQ 256
                 6*************************8.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MSQCVVPSCN LQYQGQEQDE DEGKRYSQVH HQHPPIPMPN CGVTELAWEN GSLAMHGLCG  60
LACSPPKKPI WRQVGGTLES VVHQATHHKR NSRSIDYDPN QENVDSIIAS SGGKWAENSC  120
EELMGQDPSS KRARSHEVSP RKRELSQGNS VDSTMMTWAS FESPGCLTMK TTDEVGSDCP  180
SGPGNPDEEM ENKNDTGRSP STRRSRAAAV HNQSERRRRD RINQKMKALM KLVPNSSKTD  240
KVSMLDEVIE YLKQLQAQLQ MMRLRNMPQM MMPLGMQHVP LSLLGRMRMG MGLGMGMGML  300
DMSTISRSTP QHIPPILHPT PSTPAAAFAP PFMLPQMIPP PHITTQANPD PTTSPFLSQA  360
MNMDLYNNMV ALFCQQFDQA NGSNSNVTNM GQNK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215220ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.18e-29bHLH family protein