PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72684.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 332aa MW: 37327.9 Da PI: 7.4822

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72684.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.5	2.6e-06	173	192	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r nL+ H+ RWR72684.1 173 FSCPVCYKTFNRYNNLQMHM 192 89*****************9 PP
2	zf-C2H2	14.6	9.3e-05	257	279	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ RWR72684.1 257 FMCRKCGKAFAVRGDWRTHEKNC 279 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MTDPYSNIFT GWFNFKPFFH PLTSSNPAPS IPSSFYNFAS HNNNNSSNNN SPFFPSPPPS 60 PPLREALPLL SLSPIRHEEE EPSCSTMEVC DEKKKEREES FLSTAGDETV TVALHIGLPS 120 TSAADLVVSR VSSTEMIEKE GDDGASGYPT TALNKGQYWI PTPSQILIGP TQFSCPVCYK 180 TFNRYNNLQM HMWGHGSQYR KGPESLRGTQ PTAMLRLPCY CCAPGCRNNI DHPRSKPLKD 240 FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG KLWYCTCGSD FKHKRSLKDH 300 IKAFGHGHAA YGIDCFEDDE PASEIEQDDE SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-130	C2H2 family protein