PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72677.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB
Protein Properties Length: 321aa    MW: 36396 Da    PI: 5.0708
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding482.8e-151865148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l ++  + G g+W+ +ar  g+ R++k+c++rw +yl
       RWR72677.1 18 KGLWSPEEDEKLMNYMLMNGQGCWSDVARNAGLQRCGKSCRLRWINYL 65
                     678*******************************************97 PP
2Myb_DNA-binding49.59.8e-1671114146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++ +E++l+++++  lG++ W+ Ia++++ gRt++++k++w++
       RWR72677.1  71 RGAFSSQEEDLIIQLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 114
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MRNPDHNANN SNKKKLRKGL WSPEEDEKLM NYMLMNGQGC WSDVARNAGL QRCGKSCRLR  60
WINYLRPDLK RGAFSSQEED LIIQLHSILG NRWSQIAARL PGRTDNEIKN FWNSTIKKRL  120
RNSSPSSASS FSPNNSDSSE PREAMGGFTS ISDHDIMTMC MDSSSSSTPV QAVSSLCNRF  180
DQQFDPLPRL ENVYDMTDFA TGYNHMPPYL TQVGFDVGFN GNHGIYGTVQ MGEEDEIYVP  240
PLLESGSLEE HTVTNNISGT HTNDNNKHKN NNNTNTTNTT NNNNIEEDNI FGNENYWDTE  300
NLRMVEWHLE DLMGNISSSF S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.12e-69MYB family protein