PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72636.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 300aa    MW: 33344.7 Da    PI: 7.6356
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.6e-184089255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  RWR72636.1 40 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 89
                799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MELHFQQEQQ QLKKENSVSK GSKLKGRNRG SNSNTTATNK FVGVRQRPSG RWVAEIKDTT  60
QKIRMWLGTF ETAEEAARAY DEAACLLRGS NTRTNFITHV PTSSPLASRI RNLLNHKKAT  120
KQAAHTNSST STGNTTRITS NTSTNTNTNT AAATNTSIAS RNSSSSVSTS NTSNSSSITS  180
TLSLDKVTEI QMYDDVYRPD MSSCTEEFSS VSSRSDLSWI HEPGFDRFAF TQDGFELSKQ  240
SFLPENANSE ITEFERMKVE RQISASLYAI NGVHEYLETV NEPSDALWDL PPLCQLFLHT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-30ERF family protein