PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72625.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 267aa    MW: 29693.1 Da    PI: 8.7435
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.4e-09154201455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  RWR72625.1 154 NHSLAERARREKITERMKILQDLVPGC----NKVIGKALVLDEIINYVQSLQ 201
                 79************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MAVSDHRRRP RPLQRISRCH ACRLQAGAVR SDFRFSGDNA RNNLDASGGE STVTEQSGSR  60
GGDRGRRMRD AAAASEDESS KRASTSSGNE MQTDFNIKRL KAMEARNEID DSKTEMEASS  120
CNGNQQFVQS SLPLETPKQD YIHVRARRGQ ATDNHSLAER ARREKITERM KILQDLVPGC  180
NKVIGKALVL DEIINYVQSL QRQVEFLSMK LEAVNSRMNS SMEGYSAKDT IDAAGMVFGS  240
HATREYGQGS APEWLHMQVG GCFERST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.17e-70bHLH family protein