PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72513.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 271aa MW: 30523.8 Da PI: 5.371

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.2	5e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++v+++G +W + +++ g++R++k+c++rw++yl RWR72513.1 14 RGPWSPEEDMALKKYVERHGIVeNWIALPHKAGLNRCGKSCRLRWLNYL 62 89****************779**********************97 PP
2	Myb_DNA-binding	49.1	1.3e-15	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd++++++ k +G++ W+ Ia++++ gRt++++k++w++ RWR72513.1 69 GGFTEEEDQIIYNLYKSMGSK-WSVIASHLP-GRTDNDVKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDMALKKYVE RHGIVENWIA LPHKAGLNRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDQIIY NLYKSMGSKW SVIASHLPGR TDNDVKNYWN TKLKKKFIAT 120 ETNLTTNANN ISNHENLSSS LSHVTKDESS ASFPSMDPGF GHNLLESQRL FTDPISFSLP 180 AFEESSNFSV SQSTYDAPSS SLSMDNSYNT WPRSEGDEID GFFSYGFPYD LLNGNDFPKV 240 EVASELADFS YADMVSSSET RAQGQFQSVT Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	8e-71	MYB family protein