PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72470.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 339aa    MW: 36937 Da    PI: 6.0913
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000522062441255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +++ +++  L +++ +      +K + a++L +A+ YI+ Lq
  RWR72470.1 206 RKEKLGDRITALHQIVSPF-----GKTDTASVLLEAIGYIRFLQ 244
                 6677888999999999987.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MNRGVLESSP VQQMMAGNLN WWNINNMCPP PQQPFPLVPS SSSLFPQYPP PTSSPHHGTF  60
HENQDLPESW SQMLLGGLGG EEYRCSFNNL HAKKMDNWEE PVLFSSSNAN MVDVKQESSQ  120
SGYAYGHGNE EYQAVRTAWG QILPASSQRS CVTSFSSNML DFSSSNVEGR HPQVPDHSSE  180
CNSAANGSAL KKAKIQSSAQ STFKVRKEKL GDRITALHQI VSPFGKTDTA SVLLEAIGYI  240
RFLQDQIEAL SSPYLGSGSG NTRQPVQGER NCIFPEDPGQ LLDDACMKNG GNSGKDAQDE  300
PKKDLRSRGL CLVPISCTMN VGSNNGADYW APSLGGGFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-82bHLH family protein