PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR72054.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 277aa MW: 30838.9 Da PI: 5.3491 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.9 | 9.6e-13 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ll ++ +W+ ++ g+ R++k+c++rw +yl RWR72054.1 16 KGPWTHEEDQLLRTFLLNNPNTSWRQVPPQAGLLRCGKSCRLRWMNYL 63 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 44.4 | 3.9e-14 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T eE+ l++++++ G++ W+ Ia+ ++ gRt++++k+ w++ RWR72054.1 69 RGNFTLEEENLIIQLHAAVGNK-WSVIASQLP-GRTDNEIKNLWNT 112 89********************.*********.**********997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 277 aa Download sequence |
MGRAPCCSGE HAGLKKGPWT HEEDQLLRTF LLNNPNTSWR QVPPQAGLLR CGKSCRLRWM 60 NYLRPDIRRG NFTLEEENLI IQLHAAVGNK WSVIASQLPG RTDNEIKNLW NTKLRKLLVL 120 KGINPITHQP LCNPMLSDYV KQWVKSIEDA IITGLMAQSS SNNINSNSLH PTLPSFMSLP 180 LDSSLNEEGL GQSHPLKASP NQNALTDNSW VDDGSSRLND NLDGDLMMGE EACLQDNMDE 240 YLRDGFGTVP STPFFDGYMD SMMSAANLEE GLLATKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G07690.1 | 5e-60 | MYB family protein |