PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72023.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 371aa    MW: 39203.6 Da    PI: 6.7091
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.7e-12305350655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L +llP+     +k  + ae+L +Av++Ik+Lq
  RWR72023.1 305 SIAERDRRTRISEKLKRLEDLLPNV----DKQTNTAEMLDMAVQHIKDLQ 350
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MTSSSSSSQR QMGPGLTRYV SAPGSLLKSL ADSVINDDHE FSAVGSDPMM GRFFSGDSSC  60
LTTTSESTCR PNPTNPPNHN NSSVVSSAEV GESYTTGGSK VGLERSYGFG DLAVGGGFAT  120
ASSLKGGPSL IRHSSSPAGF LSQLMVDNAG FSVTRGVGNF SSQPGYDGSH GIGNSRLKSQ  180
LSFSRQDSLS RISEGSIPDE VGESVAGHNG TDDAAGNVGQ SYMAGNFPMA SWDDTNSIVF  240
SHPPSKRAKD INGNIVPGIG SLETQFSLPQ TSLEMATVEK LLQMQPDSVP CKIRAKRGCA  300
THPRSIAERD RRTRISEKLK RLEDLLPNVD KQTNTAEMLD MAVQHIKDLQ GQVQVLKQEC  360
ASCTCGSKPI V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.13e-69bHLH family protein