PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY13850.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 321aa MW: 34956.8 Da PI: 9.2844

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY13850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.2	0.00013	231	253	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg Fs+ +L+ H ++ H RDY13850.1 231 QCPQCGAKFSSVTMLVDHVQKvH 253 7******************9988 PP
2	zf-C2H2	16.5	2.4e-05	268	290	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C++ F+++ +L+ H + H RDY13850.1 268 VCPKCSRGFRDPVSLVEHVERdH 290 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MVLFMSKKSL VAGIVAGKYD SHQNGCGKMS HQNARQKYGS FEKVYCLEHR SYIKHRCTKA 60 DKQDVTVVIC PLCAKGVRLV PDQDPNITWE NHVNTECDPS NYEKVTKKKK CPVPGCREIL 120 VFSNTIKCRD CTVDHCLKHR FGPDHKCPGP KNVETGFSFM SLLNGSKKVE SKPKSSSTAS 180 SKWTTSFLNA ASNIRASAEA GVSKLSGEIN QAWQTTTGGV GQSRSSGQVE QCPQCGAKFS 240 SVTMLVDHVQ KVHERSGNRT GAKVTIDVCP KCSRGFRDPV SLVEHVERDH ALGKASPAGI 300 ANLAVICKLN SSNSSAFSFA D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	2e-97	C2H2 family protein