PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY13354.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB_related

Protein Properties

Length: 740aa MW: 82059.9 Da PI: 9.7229

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY13354.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24	9.1e-08	625	674	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + ++ k+Rt ++k++w ++ RDY13354.1 625 RRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFdnaKHRTYVDLKDKWKTL 674 567888999********************99************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MEPKRVESLP RGKQRSDMVW SEWITPNEGT GPIQVVLLTP PAIAGYEWSN VCKQLVGVVR 60 GLRTNTGLGG FQGKLISTRS FKIPAIANVI IIQPIPKSCD PGCLQNSRKP KRLNYGFNGY 120 QVPVIPKASR SARGRGTIRK KPDSSQIQAF EILASVAGNF LQENENSSPD NAAPVKDPHA 180 FAGNTKHKHG DERGSFKEDL FEHGACSEIA SACVPSIQGK HDNHRVTEDS SFLGNHLEGQ 240 GQNVLEREDE RVKGRSVNEK TIHIKGCSYG LVEPGERVSK DCSSENNVEK PLLEGRRHLD 300 SFPSGSTARK LVNNRDDDEN LVRCSQLNSK NKISCAPPST PKLKDASPFM SGISINCITV 360 DENSRDNSEL ENSQRMYPFK KRKFFNRTSS SASDRGSQCQ GMFDSSDTRV NGTNHGTAIE 420 ESSPIVGQQV HSGSRGCNVK LSIKSFKVPE LFIDIPETAT IGSLKRTVME AVTAILGDEL 480 HVGILLQGKK VRDDSKTLIQ TGISQDDKRH RLGFMLEPRH TPISPSSYNE DPCFLTTGSR 540 QKLSRQSTSL MLQQGTYKER SMIKIESCAE GDLNVVSSLA DTSGNNNMSK CRALVAVPAI 600 NMEALAVVPF RRKSGNPDFA QRRIRRPFSV LEVEALVQAV EKLGTGRWRD VKQRAFDNAK 660 HRTYVDLKDK WKTLVHTARI SPQQRRGEPV PQELLDRVLA AHAYWSQQQC KHQLKPLLKG 720 NWSHSYHPLW SIVGMLSNAD

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MEPKRVESLP RGKQRSDMVW SEWITPNEGT GPIQVVLLTP PAIAGYEWSN VCKQLVGVVR  60
GLRTNTGLGG FQGKLISTRS FKIPAIANVI IIQPIPKSCD PGCLQNSRKP KRLNYGFNGY  120
QVPVIPKASR SARGRGTIRK KPDSSQIQAF EILASVAGNF LQENENSSPD NAAPVKDPHA  180
FAGNTKHKHG DERGSFKEDL FEHGACSEIA SACVPSIQGK HDNHRVTEDS SFLGNHLEGQ  240
GQNVLEREDE RVKGRSVNEK TIHIKGCSYG LVEPGERVSK DCSSENNVEK PLLEGRRHLD  300
SFPSGSTARK LVNNRDDDEN LVRCSQLNSK NKISCAPPST PKLKDASPFM SGISINCITV  360
DENSRDNSEL ENSQRMYPFK KRKFFNRTSS SASDRGSQCQ GMFDSSDTRV NGTNHGTAIE  420
ESSPIVGQQV HSGSRGCNVK LSIKSFKVPE LFIDIPETAT IGSLKRTVME AVTAILGDEL  480
HVGILLQGKK VRDDSKTLIQ TGISQDDKRH RLGFMLEPRH TPISPSSYNE DPCFLTTGSR  540
QKLSRQSTSL MLQQGTYKER SMIKIESCAE GDLNVVSSLA DTSGNNNMSK CRALVAVPAI  600
NMEALAVVPF RRKSGNPDFA QRRIRRPFSV LEVEALVQAV EKLGTGRWRD VKQRAFDNAK  660
HRTYVDLKDK WKTLVHTARI SPQQRRGEPV PQELLDRVLA AHAYWSQQQC KHQLKPLLKG  720
NWSHSYHPLW SIVGMLSNAD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	374	383	QRMYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	5e-93	MYB_related family protein