PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY12954.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 402aa MW: 45112.8 Da PI: 9.8271

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY12954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.9	2.5e-13	59	115	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g RDY12954.1 59 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 115 57*****************6666777775555599****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MASSSPDPGK SEAGGGSETP EATVANDEKR LKKAKKERAC TAKERISKMA PCAAGKRSSI 60 YRGVTRHRWT GRYEAHLWDK STWNQNQNKK GKQGAYDDEE AAARAYDLAA LKYWGPSALI 120 NFPVTDYARD LEEMQNVSRE EFLASLRRKS SGFSRGLSKY QGLSRCDSVK RIPKDCNKSA 180 HTGTHNFAFI IFIRWDPTYG RMAGSTYFNS VYYGEDSATE TKYLSSFCIE RKIDLSTYIK 240 WWGCNKSRKP DAGARFSAVK KQGFGGDICR ELKTLEQKVH PSEPYQLPVL GMPHERRKHE 300 RAFVSALSIL SQSAAYKNMK QKASKRQENS NDHDENENKN TIKKLDHGKE AEKSLNHDND 360 NEGLEIAMGM NGSLPLQRNV PILPAGLSSV AEVGIVAKVL YF

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MASSSPDPGK SEAGGGSETP EATVANDEKR LKKAKKERAC TAKERISKMA PCAAGKRSSI  60
YRGVTRHRWT GRYEAHLWDK STWNQNQNKK GKQGAYDDEE AAARAYDLAA LKYWGPSALI  120
NFPVTDYARD LEEMQNVSRE EFLASLRRKS SGFSRGLSKY QGLSRCDSVK RIPKDCNKSA  180
HTGTHNFAFI IFIRWDPTYG RMAGSTYFNS VYYGEDSATE TKYLSSFCIE RKIDLSTYIK  240
WWGCNKSRKP DAGARFSAVK KQGFGGDICR ELKTLEQKVH PSEPYQLPVL GMPHERRKHE  300
RAFVSALSIL SQSAAYKNMK QKASKRQENS NDHDENENKN TIKKLDHGKE AEKSLNHDND  360
NEGLEIAMGM NGSLPLQRNV PILPAGLSSV AEVGIVAKVL YF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-100	AP2 family protein