PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY12676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | FAR1 | ||||||||
Protein Properties | Length: 371aa MW: 41795.1 Da PI: 6.0332 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 91 | 1.6e-28 | 206 | 293 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkwevtk+++eH+H+l+p RDY12676.1 206 FYNAYATNVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWEVTKFVKEHTHPLTP 293 9*****************************************9988..9**************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MRENLGETEK EEAYENLRAK EDFLMLRNNE VAIVEEEASC DVQVHYLCRI VGLESGGHSV 60 SIYALPYLNN FLCSAVLSVA RNRGLQIISS ITNHFHHNPI LNCCVELEYR MCNENNIADS 120 FVAAVEFGID GSVTGETVGN TAIADDNREG GSSVEPIHKQ DEDDNMTLDS SGGITIPSAI 180 PAVSIVSVEE PYEGQEFESE SAAHAFYNAY ATNVGFIIRV SKLSRSRRDG SAIGRALVCN 240 KEGFRMPDKR EKIVRQRAET RVGCRAMILV RKVSSGKWEV TKFVKEHTHP LTPGKGRRDC 300 IYEQYPNEHD KIRELSQQLA IEKKRSATYK RHLELIFEHI EEHNESLSKK IQHIVDSVKK 360 VETKEQQSLL L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 1e-95 | FAR1 family protein |