PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY12411.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 468aa MW: 51810.1 Da PI: 9.3444

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY12411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00021	142	164	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ RDY12411.1 142 WKCEKCSKRYAVQSDWKAHSKTC 164 58*****************9998 PP
2	zf-C2H2	11.5	0.00094	172	190	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H + RDY12411.1 172 DCGTVFSRRDSFITHRAFC 190 8**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MDDGEISNAF PHQNPSTAAS NNQPPSLKRK RNLPGNPGKL VLYFMPCYHS QHLYPEAEVI 60 ALSPKTLMAT NRFGFQRDQN LQLHRRGHNL PWKLKQRTSK EVKKRVYVCP EKSCVHHHPS 120 RALGDLTGIK KHFCRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYK CDCGTVFSRR 180 DSFITHRAFC DALAEETARV NAASNMSNYS VLQNPLGPNM ATHFSSFFKS NPCTEEPGNQ 240 TSKGLSLWMT QTSQAHETIT NNNLHEFHQL GSATSPTAIY NSGGNPLASC SNPPPSNYQL 300 NWVFGNKISS NGSHQELTST ASLPLVNNIV KDNPNLQLIS VPSLYSSQHY SHQTTSANMS 360 ATALLQKAAQ VGTTSSDPSL FLGSIGLKCN SPGQDGNKFC GMYGSSSVLT SHASEAENNY 420 SGDLSQMPPT KRRHVQNEES AWGQTRDFLG VGGANHLPPF INQRMDLI

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MDDGEISNAF PHQNPSTAAS NNQPPSLKRK RNLPGNPGKL VLYFMPCYHS QHLYPEAEVI  60
ALSPKTLMAT NRFGFQRDQN LQLHRRGHNL PWKLKQRTSK EVKKRVYVCP EKSCVHHHPS  120
RALGDLTGIK KHFCRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYK CDCGTVFSRR  180
DSFITHRAFC DALAEETARV NAASNMSNYS VLQNPLGPNM ATHFSSFFKS NPCTEEPGNQ  240
TSKGLSLWMT QTSQAHETIT NNNLHEFHQL GSATSPTAIY NSGGNPLASC SNPPPSNYQL  300
NWVFGNKISS NGSHQELTST ASLPLVNNIV KDNPNLQLIS VPSLYSSQHY SHQTTSANMS  360
ATALLQKAAQ VGTTSSDPSL FLGSIGLKCN SPGQDGNKFC GMYGSSSVLT SHASEAENNY  420
SGDLSQMPPT KRRHVQNEES AWGQTRDFLG VGGANHLPPF INQRMDLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-130	C2H2 family protein