PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY12387.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 542aa MW: 59965.2 Da PI: 8.3146

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY12387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.5e-16	64	109	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + WT eEde+l dav+ + ++Wk+Ia+ ++ R++ qc +rwqk+l RDY12387.1 64 DGWTVEEDEILTDAVAVFNAKNWKSIAKLFP-ARSEVQCLHRWQKVL 109 56***************************.**********986 PP
2	Myb_DNA-binding	58.5	1.5e-18	115	161	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+++v+ v +G+ W++Ia ++ gR +kqc++rw+++l RDY12387.1 115 KGPWTQEEDDKIVEMVSIHGPSKWSLIATSLP-GRIGKQCRERWHNHL 161 79****************************.***********97 PP
3	Myb_DNA-binding	55.1	1.8e-17	167	210	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ + da++ +G++ W+ Ia+ ++ gRt++ +k++w++ RDY12387.1 167 KDAWTLEEELAIMDAHHIHGNK-WAEIAKILP-GRTDNAIKNHWNS 210 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
KDMAEAEEKS EQCCLENKQI NATSGSSVSE GSGSAIPKSS SECSPGSTLP SNRRTTGPVR 60 RTKDGWTVEE DEILTDAVAV FNAKNWKSIA KLFPARSEVQ CLHRWQKVLN PELIKGPWTQ 120 EEDDKIVEMV SIHGPSKWSL IATSLPGRIG KQCRERWHNH LNPDIKKDAW TLEEELAIMD 180 AHHIHGNKWA EIAKILPGRT DNAIKNHWNS SLKKKVDFYL ATGTLPPIPI PKNSAQASVK 240 DTVRHSTTNT IHDCSNKGLD ATIVSSSINT YISKLDNSDK NQLESSGIVR EVGDSSNVPA 300 NESAESYFIE CNSSSNNGLS CSNSEPVNGY NFRIISEPKF ENPELNGNPT IYHCMNNDEM 360 NSGKLTRNLF PKESPIVGSF YYEPPKFGNS LPFNISGLQN EFFSYPMMSP VGFLTPPPVK 420 GSELWSESPE SILKKAAKTF PTPSIVRKRS NGVKRPATPS KGAKAVNDSH AYNEQARTND 480 ISGSEVVRLS LTLSPPSHSY ESNIAHSKAI NTTPPYRLRS KQTAIKSLEK QLESAFVIEK 540 RR

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

KDMAEAEEKS EQCCLENKQI NATSGSSVSE GSGSAIPKSS SECSPGSTLP SNRRTTGPVR  60
RTKDGWTVEE DEILTDAVAV FNAKNWKSIA KLFPARSEVQ CLHRWQKVLN PELIKGPWTQ  120
EEDDKIVEMV SIHGPSKWSL IATSLPGRIG KQCRERWHNH LNPDIKKDAW TLEEELAIMD  180
AHHIHGNKWA EIAKILPGRT DNAIKNHWNS SLKKKVDFYL ATGTLPPIPI PKNSAQASVK  240
DTVRHSTTNT IHDCSNKGLD ATIVSSSINT YISKLDNSDK NQLESSGIVR EVGDSSNVPA  300
NESAESYFIE CNSSSNNGLS CSNSEPVNGY NFRIISEPKF ENPELNGNPT IYHCMNNDEM  360
NSGKLTRNLF PKESPIVGSF YYEPPKFGNS LPFNISGLQN EFFSYPMMSP VGFLTPPPVK  420
GSELWSESPE SILKKAAKTF PTPSIVRKRS NGVKRPATPS KGAKAVNDSH AYNEQARTND  480
ISGSEVVRLS LTLSPPSHSY ESNIAHSKAI NTTPPYRLRS KQTAIKSLEK QLESAFVIEK  540
RR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09370.1	1e-118	MYB family protein