PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY12360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 331aa MW: 37520.1 Da PI: 8.7535 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.1 | 2.8e-15 | 50 | 97 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l ++++ +G g W+ +++ g++R++k+c++rw++yl RDY12360.1 50 KGAWTALEDKILSEYIHIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYL 97 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.9e-16 | 103 | 146 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ RDY12360.1 103 RGNITNDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 146 7999******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
KTCYASAGNI EYQFSPSRDH IHTYTCTCTK RKRSRSMGRS PCCSKEGLNK GAWTALEDKI 60 LSEYIHIHGE GKWRHLPKRA GLKRCGKSCR LRWLNYLRPG IKRGNITNDE EELIIRLHKL 120 LGNRWSLIAG RLPGRTDNEI KNYWNTNIGR KLQNGSPGYS SITSGGAPNT VQQDRSLKNQ 180 ERHYPYSPNN SCLVQTKATR WAKVTATKDI ISQHNEGIIN SNNVGDNKMK TFSVSPSSES 240 NNDPVLDFME DLEMDGNFFS ELLKMDLPES SCQEHKILVE ENGNPSTVNK GYLSPKSSSD 300 TTHFLWGDSL YDTNFDFLPV ASFIESGFDW L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 3e-61 | MYB family protein |