PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY12332.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HSF

Protein Properties

Length: 447aa MW: 50529.7 Da PI: 4.8325

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY12332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.7	4.2e-34	20	111	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++++++d++l+ +isw ++g sfvv+d+ ef++ vLp++Fkh+nf+SFvRQLn+YgF+k+++++ weF ++ F++gkk+ll++i+ RDY12332.1 20 FLSKTFDLVDDSTLDPIISWGSTGFSFVVWDPLEFSRLVLPRHFKHNNFSSFVRQLNTYGFRKIDTDK---------WEFFNEAFQRGKKHLLKNIQ 107 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+ks RDY12332.1 108 RRKS 111 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MNRIDDNSPK PLEILQIPPF LSKTFDLVDD STLDPIISWG STGFSFVVWD PLEFSRLVLP 60 RHFKHNNFSS FVRQLNTYGF RKIDTDKWEF FNEAFQRGKK HLLKNIQRRK SPQSQQVDSY 120 IGLGSSTDAG RPDVELEIEM LKKERSMLME EVVNLQQQQR RTVHRAGEVN QRLQSAEQRQ 180 KQMVSFLAKL FQNPAFLARL RHKKEQREID SPRVVRKFVK QHQHETEKAE ALKEGQIVRY 240 QPDWTNIGMS CETPELSPVS IDHSPHYPSQ GLAGEMSVGA EDLTAQFENI VSYDLAAVHG 300 ITPSQEMIGE GSSSFGLEDP LFKGKSVLSP NLEVPLEHVA SFPETLTKEK GFLDFSALGT 360 EGIIKLEDIW ESGLNVSGAA SSCGNELWGN PINYEDVLEF GITSGMSESD MWDITASLGI 420 DQCPADEPSL DETYGQPKED RPKNVDP

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MNRIDDNSPK PLEILQIPPF LSKTFDLVDD STLDPIISWG STGFSFVVWD PLEFSRLVLP  60
RHFKHNNFSS FVRQLNTYGF RKIDTDKWEF FNEAFQRGKK HLLKNIQRRK SPQSQQVDSY  120
IGLGSSTDAG RPDVELEIEM LKKERSMLME EVVNLQQQQR RTVHRAGEVN QRLQSAEQRQ  180
KQMVSFLAKL FQNPAFLARL RHKKEQREID SPRVVRKFVK QHQHETEKAE ALKEGQIVRY  240
QPDWTNIGMS CETPELSPVS IDHSPHYPSQ GLAGEMSVGA EDLTAQFENI VSYDLAAVHG  300
ITPSQEMIGE GSSSFGLEDP LFKGKSVLSP NLEVPLEHVA SFPETLTKEK GFLDFSALGT  360
EGIIKLEDIW ESGLNVSGAA SSCGNELWGN PINYEDVLEF GITSGMSESD MWDITASLGI  420
DQCPADEPSL DETYGQPKED RPKNVDP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	198	206	ARLRHKKEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	4e-99	HSF family protein