PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY12327.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 573aa MW: 65896 Da PI: 7.0185

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY12327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.1	5.6e-29	121	206	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++ ++++++ k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r+ + +++++f+qlea RDY12327.1 121 RWPRQETLTLLEIRSRLDPKFKEANHKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRH--DGKHYRFFRQLEA 206 8***********************************999*************************985..5557*****85 PP
2	trihelix	53.2	7.8e-17	418	500	2	83
trihelix 2 WtkqevlaLiearremeerlrrgk.lkkplWeevskkmrergferspkqCkekwenlnkrykki.kegekkrtsessstcpyfd 83 W+++e+ L ++r em++r+ ++ +++ Weev+ km+ g+ers+ +Ckekwe+++++ ++ keg+kk ++e+s++c yf+ RDY12327.1 418 WPESEIARLQQLRAEMGTRFPHSEiSEEVTWEEVATKMACFGYERSALMCKEKWESMSNYPREDsKEGNKK-RKENSRSCFYFK 500 *******************9876999***************************998751555555.589999**98 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MEDHHHHHHH QHQHQPHHFG MTDLRHVLNG PRPPHDFPSM PPHPTAELFP GHRNLTPLPT 60 PQQHYEVMMF SRDIMPPGLH DFASTTHDSA AATIAMPTPS ATTGFDADGA GCIAGDASTG 120 RWPRQETLTL LEIRSRLDPK FKEANHKGPL WDEVSRIMSE EHGYQRSGKK CREKFENLYK 180 YYKKTKEGKA GRHDGKHYRF FRQLEALYGE NSNTVSIPET NVVSSIHFQA NSHAPSQTNQ 240 DKFHSHNNKH CDSLSLTNST NFDTSSSDDG NDHSMENESM EKRRKRKSGR SWKVKIKEFI 300 DSQMRKLVEK QKEWLDKLVK TLEDKEKERM VREEEWRKQE ANRLEREQKF WAKERAWIEA 360 RDAALMEALQ KLTGREIMKA ETNEGIINAM AGEVQNQNNE DGSEILNSSG VIRGADSWPE 420 SEIARLQQLR AEMGTRFPHS EISEEVTWEE VATKMACFGY ERSALMCKEK WESMSNYPRE 480 DSKEGNKKRK ENSRSCFYFK NNDGQQSSLY DQGSAYCDDI NHQRPNGSSS PSKSNVANVP 540 QADSCFPFLM STEGGNLWDN DYGLKLNKAN QNH

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MEDHHHHHHH QHQHQPHHFG MTDLRHVLNG PRPPHDFPSM PPHPTAELFP GHRNLTPLPT  60
PQQHYEVMMF SRDIMPPGLH DFASTTHDSA AATIAMPTPS ATTGFDADGA GCIAGDASTG  120
RWPRQETLTL LEIRSRLDPK FKEANHKGPL WDEVSRIMSE EHGYQRSGKK CREKFENLYK  180
YYKKTKEGKA GRHDGKHYRF FRQLEALYGE NSNTVSIPET NVVSSIHFQA NSHAPSQTNQ  240
DKFHSHNNKH CDSLSLTNST NFDTSSSDDG NDHSMENESM EKRRKRKSGR SWKVKIKEFI  300
DSQMRKLVEK QKEWLDKLVK TLEDKEKERM VREEEWRKQE ANRLEREQKF WAKERAWIEA  360
RDAALMEALQ KLTGREIMKA ETNEGIINAM AGEVQNQNNE DGSEILNSSG VIRGADSWPE  420
SEIARLQQLR AEMGTRFPHS EISEEVTWEE VATKMACFGY ERSALMCKEK WESMSNYPRE  480
DSKEGNKKRK ENSRSCFYFK NNDGQQSSLY DQGSAYCDDI NHQRPNGSSS PSKSNVANVP  540
QADSCFPFLM STEGGNLWDN DYGLKLNKAN QNH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	310	KRRKRKSGRSWKVKIKEFIDSQMRKLVEK
2	282	312	KRRKRKSGRSWKVKIKEFIDSQMRKLVEKQK
3	283	313	KRRKRKSGRSWKVKIKEFIDSQMRKLVEKQK
4	284	314	KRRKRKSGRSWKVKIKEFIDSQMRKLVEKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-126	Trihelix family protein