PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY12197.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 484aa MW: 52980.6 Da PI: 6.5033

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY12197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.0004	381	413	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ +L++++ + +K + a++L +A+ YIk Lq RDY12197.1 381 DRITTLQQIVSPF-----GKTDTASVLFEAIGYIKFLQ 413 7888999999887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MGEECSENSV STATLNWWEL HASSLSPLSN TNSTWINNQT NPNSSCSCGE DIPVSGSSSF 60 TNASNLSSLT VEVSSSSLIG RPAASSNEFM GDQHVSDNQL WSHVLSDVCS EEFHSSSQEI 120 GEKFLDALSS KGMTRSSFEP ACDYLKKLDT AWEYSGSTSF NGFEKHLNGF SDEIIENNGR 180 LNKLSNLETT WPNAPPDPEF NTLSSLANHH TQSNPSHIKQ PFGDSTTCSV GETSTSFPCY 240 GLDMKVKQEY YANEVAGSGF GRSSFNTVTG SLNGFNNLLN GMPNFSPCTR NFSDVISFTS 300 RLARPIVGFH APIPSLTSSD SRKQVLQTSS PTRTTNRKGD GRTSEVKKKR SEESSDATLK 360 KPKQDTSKES CTKTPKVKLG DRITTLQQIV SPFGKTDTAS VLFEAIGYIK FLQEQVQLLS 420 NPYLKTNTHK DPWGSFDKKD KGDAKLDLRS RGLCVVPISC TPQLCRENSG ADYCTPAYRG 480 CLYR

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MGEECSENSV STATLNWWEL HASSLSPLSN TNSTWINNQT NPNSSCSCGE DIPVSGSSSF  60
TNASNLSSLT VEVSSSSLIG RPAASSNEFM GDQHVSDNQL WSHVLSDVCS EEFHSSSQEI  120
GEKFLDALSS KGMTRSSFEP ACDYLKKLDT AWEYSGSTSF NGFEKHLNGF SDEIIENNGR  180
LNKLSNLETT WPNAPPDPEF NTLSSLANHH TQSNPSHIKQ PFGDSTTCSV GETSTSFPCY  240
GLDMKVKQEY YANEVAGSGF GRSSFNTVTG SLNGFNNLLN GMPNFSPCTR NFSDVISFTS  300
RLARPIVGFH APIPSLTSSD SRKQVLQTSS PTRTTNRKGD GRTSEVKKKR SEESSDATLK  360
KPKQDTSKES CTKTPKVKLG DRITTLQQIV SPFGKTDTAS VLFEAIGYIK FLQEQVQLLS  420
NPYLKTNTHK DPWGSFDKKD KGDAKLDLRS RGLCVVPISC TPQLCRENSG ADYCTPAYRG  480
CLYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	2e-40	bHLH family protein