PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY11754.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 992aa MW: 113657 Da PI: 8.8177

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY11754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00048	876	901	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C++sF +k +L +H r+ + RDY11754.1 876 YQCDidGCTMSFGSKQELLHHKRNiC 901 99********************9877 PP
2	zf-C2H2	13.5	0.00021	901	923	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H RDY11754.1 901 CPvkGCGKKFFSHKYLVQHRRVH 923 9999*****************99 PP
3	zf-C2H2	12.5	0.00046	959	985	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H RDY11754.1 959 YVCAepGCGQTFRFVSDFSRHKRKtgH 985 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 992 aa Download sequence
MKKDVQDGIH DVPVQSSREA LNTASENGNT ALALLVSAYG NSSDSEEEHI AVDNNESNVI 60 NSASESLRSH TQDSHASPMT ALDKGDDIPS KSASCEDFMH HRFECNLSHQ SLDHSFKKQE 120 YNNTSGVTSE NTRAVPNSPA NCSQDAHGAE RSLSNKSMVP FDNKNASMVL QSDEDSSRMH 180 VFCLEHAAEA EQQLRPIGGA HIFLLCHPDF PKIEAEAQSV AEDLGIDYTW KDIHYRHASK 240 EDEERIQLAL DSEEAIPGNG DWAVKLGINL FYSANLSRSP LYSKQMPYNS VIYYAFGCSS 300 PASSPVEPKV YQRRVNKQRK VVAGKWCGKV WMSNQVHPLL AKRDSEDVED EKLLLGWILP 360 DEKIERPEST PKSETTSRKS GKKRKMTAEN GRMRKGSYAK KNVVSDNSTE NKPNSQPRRV 420 LRSKKARHVE RDHAALKGDY SPPYHHRKPI SKQTNCSESD AVSDDSLDDD DDMQHRRNIN 480 VEKAKFNDND VVSNDTVDCD SDWQQREELS SKQVEDTERD AISEDSLDVG SLQLQRKTSR 540 GKHAKYISEE DIISDDQMES RFQKRQRRIP KSRQGKYLTG RDIISDDQIV LKMQKQQRRN 600 PKSRQAKYLN EEDIASDDQL EGHYRRYQRR TPKGRQEKMK CVAGEDEMSD DQLEDHCQKQ 660 QTSFSRERQI KGNDREVKNV MSDDQLEDHF LKQQRRFPKS RQNKHTDKEV MDDSAENNSH 720 LLHRTPKRKQ TKCMDEDDMN SDDEMEEDQQ LRRTLRSKQS KPKTLQQIKQ ANSLQVKSQA 780 SRPIKRGARM LMKSKAPPQT KQPSHLLNKQ SKEFSLHMEE EEEGGPSTRL RKRATKAQES 840 EGKLKDKQTK RKKVKNATAA KVSVGHAKVK DEEAEYQCDI DGCTMSFGSK QELLHHKRNI 900 CPVKGCGKKF FSHKYLVQHR RVHEDERPLK CPWKGCKMTF KWAWARTEHI RVHTGARPYV 960 CAEPGCGQTF RFVSDFSRHK RKTGHSAKKS RQ

Sequence ? help Back to Top

Protein Sequence Length: 992 aa Download sequence

MKKDVQDGIH DVPVQSSREA LNTASENGNT ALALLVSAYG NSSDSEEEHI AVDNNESNVI  60
NSASESLRSH TQDSHASPMT ALDKGDDIPS KSASCEDFMH HRFECNLSHQ SLDHSFKKQE  120
YNNTSGVTSE NTRAVPNSPA NCSQDAHGAE RSLSNKSMVP FDNKNASMVL QSDEDSSRMH  180
VFCLEHAAEA EQQLRPIGGA HIFLLCHPDF PKIEAEAQSV AEDLGIDYTW KDIHYRHASK  240
EDEERIQLAL DSEEAIPGNG DWAVKLGINL FYSANLSRSP LYSKQMPYNS VIYYAFGCSS  300
PASSPVEPKV YQRRVNKQRK VVAGKWCGKV WMSNQVHPLL AKRDSEDVED EKLLLGWILP  360
DEKIERPEST PKSETTSRKS GKKRKMTAEN GRMRKGSYAK KNVVSDNSTE NKPNSQPRRV  420
LRSKKARHVE RDHAALKGDY SPPYHHRKPI SKQTNCSESD AVSDDSLDDD DDMQHRRNIN  480
VEKAKFNDND VVSNDTVDCD SDWQQREELS SKQVEDTERD AISEDSLDVG SLQLQRKTSR  540
GKHAKYISEE DIISDDQMES RFQKRQRRIP KSRQGKYLTG RDIISDDQIV LKMQKQQRRN  600
PKSRQAKYLN EEDIASDDQL EGHYRRYQRR TPKGRQEKMK CVAGEDEMSD DQLEDHCQKQ  660
QTSFSRERQI KGNDREVKNV MSDDQLEDHF LKQQRRFPKS RQNKHTDKEV MDDSAENNSH  720
LLHRTPKRKQ TKCMDEDDMN SDDEMEEDQQ LRRTLRSKQS KPKTLQQIKQ ANSLQVKSQA  780
SRPIKRGARM LMKSKAPPQT KQPSHLLNKQ SKEFSLHMEE EEEGGPSTRL RKRATKAQES  840
EGKLKDKQTK RKKVKNATAA KVSVGHAKVK DEEAEYQCDI DGCTMSFGSK QELLHHKRNI  900
CPVKGCGKKF FSHKYLVQHR RVHEDERPLK CPWKGCKMTF KWAWARTEHI RVHTGARPYV  960
CAEPGCGQTF RFVSDFSRHK RKTGHSAKKS RQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	831	853	RKRATKAQESEGKLKDKQTKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	7e-76	C2H2 family protein