PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY11100.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

CO-like

Protein Properties

Length: 364aa MW: 40673.5 Da PI: 5.8869

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY11100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.9	8.5e-08	12	55	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + + ++++fC ++ +lC+ C + H+ H++v RDY11100.1 12 ARACDSCIRRRARWFCAADDAFLCHGCDTLVHSAnqlasrHERV 55 578*****************************657788888876 PP
2	CCT	66.9	5.7e-23	309	351	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea+++RY+eKr+tR+F KkirYe+RK +Ae+RpR+KGrFvk+ RDY11100.1 309 REARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKR 351 9****************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MKEAGALGAK TARACDSCIR RRARWFCAAD DAFLCHGCDT LVHSANQLAS RHERVRLQTA 60 SSKVTTTAHA WHSGFTRKAR TPRHNNTKHF ALQQRLKDEV LFNNTSVLPL VPELGGEEQE 120 PAVVETEEQI LCRVPVFDPF DLRTDDLDSF SDMDFAEFAA DVESLLDKED DEVSACMGGG 180 GGVQGAMAKV KDEDEVDGDV ACYLEAVFDM TNDDAFRWNN IESVLSGERE EKEGVVACDG 240 GVSEEGGTKR DIFLRLNYDE VITAWASQGS SPWTTPNPPK FNSDYDFCLG LSGADGEVRS 300 LRGHLDGGRE ARVSRYREKR RTRLFAKKIR YEVRKLNAEK RPRMKGRFVK RTCFVGANAF 360 PAYH

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MKEAGALGAK TARACDSCIR RRARWFCAAD DAFLCHGCDT LVHSANQLAS RHERVRLQTA  60
SSKVTTTAHA WHSGFTRKAR TPRHNNTKHF ALQQRLKDEV LFNNTSVLPL VPELGGEEQE  120
PAVVETEEQI LCRVPVFDPF DLRTDDLDSF SDMDFAEFAA DVESLLDKED DEVSACMGGG  180
GGVQGAMAKV KDEDEVDGDV ACYLEAVFDM TNDDAFRWNN IESVLSGERE EKEGVVACDG  240
GVSEEGGTKR DIFLRLNYDE VITAWASQGS SPWTTPNPPK FNSDYDFCLG LSGADGEVRS  300
LRGHLDGGRE ARVSRYREKR RTRLFAKKIR YEVRKLNAEK RPRMKGRFVK RTCFVGANAF  360
PAYH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	320	336	RRTRLFAKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	4e-75	CO-like family protein