PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY10833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | C2H2 | ||||||||
Protein Properties | Length: 227aa MW: 25574.6 Da PI: 7.8554 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00025 | 51 | 73 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C++ F++ L H+++H RDY10833.1 51 YACSFCKREFRSAQALGGHMNVH 73 89*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MLDSYRFGLK ITIDKESSME GNYLNRNTPQ REDNFGFEDH TWGTSWPARN YACSFCKREF 60 RSAQALGGHM NVHRRDRARL RSSLSSWVSE CPKPNPSTKP NPTLLPPSSS PSPSTDESLN 120 YAHPSPLCSP CLTLSSSPSP ASTSGDKKPR LTPSQFPLLC PQSREIKTMS KNTRSGFSVD 180 EEMKGFVEEE EHKGFKNNEQ NITLELGIGL LKHQEEKLDL ELRLGHF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23130.1 | 3e-15 | C2H2 family protein |