PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY10755.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NAC | ||||||||
Protein Properties | Length: 225aa MW: 25797.1 Da PI: 9.2562 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.3 | 2.6e-52 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evd++k++PwdLp e+e yfFs+++ ky++g+r+nrat+sgyWkatg dk+++++ +++ RDY10755.1 14 LPPGFRFHPTDEELVVQYLKRKVFSYPLPA-SIIPEVDVCKSDPWDLPG--GDLEQERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQIITSkGNQ 109 79****************************.89***************3..3346799*********************************99875777 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 lvg+kktLvfy+g+ p+g++tdW+mheyrl RDY10755.1 110 LVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 139 8***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MEKVNFVKNG ELRLPPGFRF HPTDEELVVQ YLKRKVFSYP LPASIIPEVD VCKSDPWDLP 60 GGDLEQERYF FSTKEAKYPN GNRSNRATNS GYWKATGLDK QIITSKGNQL VGMKKTLVFY 120 RGKPPHGSRT DWIMHEYRLH SQSPAVPMEN WVLCRIFLKR RSGAKNGEDS CVKVRNSSVV 180 FYDFLAQNKT DSSSSGITEV STHEESDELE ESSSSNTFPY FRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-97 | NAC family protein |