PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY10358.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

M-type_MADS

Protein Properties

Length: 792aa MW: 91228.6 Da PI: 7.7911

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY10358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	37.7	2.6e-12	37	77	2	42
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42 +i n+ r++++ kR++ lK e LS+LC++e++ i++s+ RDY10358.1 37 FIANDYERKTSYMKRKKSFLKMTEQLSTLCGIEACAIVYSP 77 799************************************97 PP
2	SRF-TF	47.4	2.4e-15	250	288	3	41
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41 i n++ r++++ kR+ +lKK ELS+LC++e++ i++s RDY10358.1 250 IANDTERKTSYGKRKRSLLKKTAELSTLCGIEACAIVYS 288 89************************************9 PP
3	SRF-TF	47.9	1.7e-15	497	538	3	44
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44 i n+s r+++f+kR + +lKK E+S+LCd+e++ i++s+ + RDY10358.1 497 IANDSERKISFTKRTKSLLKKTGEISTLCDIEACAIVYSTYN 538 89*************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 792 aa Download sequence
MWKTSWLYHT KQKTSNKCLH EIKPVTIMPR KSVKNTFIAN DYERKTSYMK RKKSFLKMTE 60 QLSTLCGIEA CAIVYSPYHC EPEIWPSESG VLNVVGKFRD LPEWEQSKKM VNQEGFVAQS 120 ILKGKEKMRK LVKDNKDTEI TMFMYECLNT GRVQPYNNMT TADLNYLSSI IEQKLKNINT 180 RLETLNVIEM SNPASQPQSQ MQTAAPHEMP TLLNYGHGSD MNANTMESEW LLDLLNVTIM 240 SQKRVKNAYI ANDTERKTSY GKRKRSLLKK TAELSTLCGI EACAIVYSIY DPVPEIWPSE 300 SGVQNVLRKF RTLPEWEQSK KMVNQEGFIA QSILKSKEKM GKLVTDNKDT EMSMFIVQCL 360 NTGRVQPQNI MTTADMNNLS SIIEQKLKEI STRLETLNVN EMTPHQPEIQ TSTLVVAPEE 420 MTLLNYGHAW DMNPNPIQRQ CFMDLLNGNV DETVMPLFGD IVVVAVETTS KSFQFLFCFS 480 VLLVTIMSQK RVKNALIAND SERKISFTKR TKSLLKKTGE ISTLCDIEAC AIVYSTYNRE 540 PEIWPSESGV RNVVEKFRTI PEFEQNKRME NLESFITQRI QKANEQKKKL MKDNREKEMS 600 MFMFQCLNEG RVLSFNNMTA ADLNDLSSVI EQKLKDINRR LEMLNVNVMT ESQPQPHQQP 660 QMQTLPYQQP QMQTLPYQQS EIQTLPYQQS QIQTLLYQQS QIQTLPYQQP QMQTLTYQPQ 720 IQTAESQTQI QIPAYHPQVQ TAPATTLLNY GHGSDMNANP LERQWFMDLQ NGNVDETVTP 780 LFGDKAHGCH NI

Sequence ? help Back to Top

Protein Sequence Length: 792 aa Download sequence

MWKTSWLYHT KQKTSNKCLH EIKPVTIMPR KSVKNTFIAN DYERKTSYMK RKKSFLKMTE  60
QLSTLCGIEA CAIVYSPYHC EPEIWPSESG VLNVVGKFRD LPEWEQSKKM VNQEGFVAQS  120
ILKGKEKMRK LVKDNKDTEI TMFMYECLNT GRVQPYNNMT TADLNYLSSI IEQKLKNINT  180
RLETLNVIEM SNPASQPQSQ MQTAAPHEMP TLLNYGHGSD MNANTMESEW LLDLLNVTIM  240
SQKRVKNAYI ANDTERKTSY GKRKRSLLKK TAELSTLCGI EACAIVYSIY DPVPEIWPSE  300
SGVQNVLRKF RTLPEWEQSK KMVNQEGFIA QSILKSKEKM GKLVTDNKDT EMSMFIVQCL  360
NTGRVQPQNI MTTADMNNLS SIIEQKLKEI STRLETLNVN EMTPHQPEIQ TSTLVVAPEE  420
MTLLNYGHAW DMNPNPIQRQ CFMDLLNGNV DETVMPLFGD IVVVAVETTS KSFQFLFCFS  480
VLLVTIMSQK RVKNALIAND SERKISFTKR TKSLLKKTGE ISTLCDIEAC AIVYSTYNRE  540
PEIWPSESGV RNVVEKFRTI PEFEQNKRME NLESFITQRI QKANEQKKKL MKDNREKEMS  600
MFMFQCLNEG RVLSFNNMTA ADLNDLSSVI EQKLKDINRR LEMLNVNVMT ESQPQPHQQP  660
QMQTLPYQQP QMQTLPYQQS EIQTLPYQQS QIQTLLYQQS QIQTLPYQQP QMQTLTYQPQ  720
IQTAESQTQI QIPAYHPQVQ TAPATTLLNY GHGSDMNANP LERQWFMDLQ NGNVDETVTP  780
LFGDKAHGCH NI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48670.1	1e-44	M-type_MADS family protein