PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY10180.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 316aa    MW: 35378.9 Da    PI: 6.3601
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY10180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.82.2e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd+ l ++++ +G+g+W+t ++  g+ R++k+c++rw +yl
       RDY10180.1 14 KGPWTPEEDLMLTNYIQTHGPGNWRTLPKNAGLQRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding54.82.2e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
       RDY10180.1  67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MGRAPCCDKN GLKKGPWTPE EDLMLTNYIQ THGPGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHAPRL DLLDMSSMLR SVIGNPSFLN LQGLLGAQAL MNPEFLKLAA TATLLSLKNE  180
TPSNLVSQQI INAGNIQVQS QVAPNQFQTP TQSNNVNALS SSPESSIPSY LGENYLNNAQ  240
QNYQGDLLQD PELVHYLNNA NQNIGYESVL STPLSTPTPL NSSSTYVNSI TEEERDTYCS  300
DVFKLEIPES LDISDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.18e-86MYB family protein