PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY09690.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 359aa MW: 39271.8 Da PI: 6.0454

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY09690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.7	6.5e-16	136	182	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq RDY09690.1 136 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 182 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MGDMYHFDKN LSSQDEISLF LRQILLRSSP SSASHSIPGS CNSNAVHQNV NTHPSFTASP 60 LQDGKISTLD STASFVIKPQ PAFAANVSSS SFGVSENEND DYDCESEEGV EALAGEVPTK 120 PALSRSTSKR SRAAEVHNLS EKRRRSRINE KMKALQNLIP NSNKTDKASM LDEAIEYLKQ 180 LQLQVQMLSM RNGLSLHPMC FPEGLQPLQL SQMGIEFSER NRSTSLNMSA TLPLQQENPL 240 HYASKHTLPN QPPAPYPPYI NNSETSLGPD MKPLQLQGGG SSEPIGREDI LQYQQSSAIH 300 SDTNTLGGSQ GTTVSLPFDT QTCDPKDNNS LQPCIGGRDK SRVIMRNSEA NIVVTPQLS

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MGDMYHFDKN LSSQDEISLF LRQILLRSSP SSASHSIPGS CNSNAVHQNV NTHPSFTASP  60
LQDGKISTLD STASFVIKPQ PAFAANVSSS SFGVSENEND DYDCESEEGV EALAGEVPTK  120
PALSRSTSKR SRAAEVHNLS EKRRRSRINE KMKALQNLIP NSNKTDKASM LDEAIEYLKQ  180
LQLQVQMLSM RNGLSLHPMC FPEGLQPLQL SQMGIEFSER NRSTSLNMSA TLPLQQENPL  240
HYASKHTLPN QPPAPYPPYI NNSETSLGPD MKPLQLQGGG SSEPIGREDI LQYQQSSAIH  300
SDTNTLGGSQ GTTVSLPFDT QTCDPKDNNS LQPCIGGRDK SRVIMRNSEA NIVVTPQLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	1e-49	bHLH family protein