PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY08513.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 34002.1 Da PI: 5.4541 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.4e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed+ l d+v+++G g+W++ +++ g++R++k+c+ rw++yl RDY08513.1 14 RGAWTAQEDKVLTDYVTLHGEGRWRSLPQKAGLKRCGKSCRFRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+v+++k+lG++ W++Ia +++ gRt++++k++w++ RDY08513.1 67 RGNISSDEEELIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 78999*****************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MGRSPGCSKE GLNRGAWTAQ EDKVLTDYVT LHGEGRWRSL PQKAGLKRCG KSCRFRWLNY 60 LRPDIKRGNI SSDEEELIVR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKRVKDGD 120 QTITTSSRRF SSQLPNENEN KTQNPMPHLG TPKLDSHVVH TKATKCSKLL ILNPLPQPSM 180 QLPNKSNGEV EVEEEEATLV DALNNQMKRG AYDNDILPFC GEEKEVSNDL LVDFNVGDIC 240 LSDLLNSDLS DPCNLSCNDP IMSSDELLKE WTQSDFEDAS NNLYSFISFL ESDHENHNGI 300 K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 7e-64 | MYB family protein |