PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY08496.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 1141aa MW: 125139 Da PI: 5.0238

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY08496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.1	2.3e-14	37	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd++l +av+++ g++Wk+I + k Rt+ qc +rwqk+l RDY08496.1 37 KGQWTLEEDDILRKAVQRFKGKNWKKIGTECFKDRTDVQCLHRWQKVL 84 799***********************99999**********986 PP
2	Myb_DNA-binding	61.8	1.4e-19	90	136	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++++vk+ G++ W++Ia++++ gR +kqc++rw ++l RDY08496.1 90 KGPWSKEEDEIIIELVKKNGPKKWSSIAQHLP-GRIGKQCRERWCNHL 136 79****************************.**********996 PP
3	Myb_DNA-binding	38.9	2e-12	142	202	1	45
TSSS-HHHHHHHHHHHHHTTTT..............-HHHHHHHHT..TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..............tWktIartmg..kgRtlkqcksrwq 45 + +WT+eE++ l++ ++++G++ + +++a ++ +Rt++ +k++w+ RDY08496.1 142 KEAWTQEEELALIHFHQKHGNRwaelskfilnllyqQASKVATYLCfcGNRTDNAIKNHWN 202 579*********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1141 aa Download sequence
MDGEQSMPAP SHGHVDGAQK VRALHGRTTG PARRSTKGQW TLEEDDILRK AVQRFKGKNW 60 KKIGTECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IIELVKKNGP KKWSSIAQHL 120 PGRIGKQCRE RWCNHLDPTI KKEAWTQEEE LALIHFHQKH GNRWAELSKF ILNLLYQQAS 180 KVATYLCFCG NRTDNAIKNH WNSSVKKKLD SYLASGLLTR FESGPHVGNS NQPTRLQCRG 240 DDNGPKGTEG EEVSECSQGS ANAVCFPSAR GTSSADLPTG EAYRPKEECS LGKDHSVSRA 300 SCSEPYYVSI DDVTMCIPEI AYEEACTSQF IEQQSHEPGN SISGDCQFNL HSLPNISSMV 360 LGQESSQLQR DCIAPSEVCD MVNVPFQNSV ELGVSTSMGC ASMDSLKPEH MLISDDECCR 420 VLFSGATNDG CFPPVDYSKG EDMVEFSGCT SFLCQSCNIQ ISETGGTSTP QLTCPQCSDN 480 YKVTSSSQSV LPVLSASDDR LVPTANGNQL FRTDHQFVSG TPANFTYVND ISSSPCVDGI 540 GSAVAVLQEP HDTLEDTSKL VPVNSFGCGS DAKQTCNPID EETNVHAEQE DSGSLCYEPP 600 RFPSLDIPFF SCDLVQSGID MQQEFSPLGI RQFMMSSMNC LTPFRLWDSP SRDDSPDALL 660 KSAAKTFTGT PSILKKRHRD LLSPLSDKRI DKKLETDMTS TFTKKISSLD VMFGDNETRE 720 ADMPSSSLHK QNTSASVDDD NKENCEQAYK GASSSSLQKQ NNSASVDDDN KENCGQAYKG 780 ASSSSLQKQN TSSSVDDDNK ENCGQAYKGA SSLQKKNTSA FVDDDNKENC GQAYKGEQVD 840 EPIKSVILDE KKSQKDTVSN SQHNVKQLPL DSKMKSDATS AEIEQQPCEV LVEHDVNDMS 900 LSSPDQVGLK SDRGLGSSAK TPKSLNRSLE AAPNQSCHLK LSSENPRSKV NSPCVRPKEQ 960 ETLSIAIPRV QAPGDNSGDQ TRKDGGFETC SIFGGTPFRK GIESPSAWKS PWFFNTSLFS 1020 PREITIEDFG YLMSPGDRSY DAIGLLKQIS EQTAATYANA QEILGNETPK ALPKDACGND 1080 KDKDPENNDP PNQPGNHSQL ASNALIERRT LDFSECGTPG KSDNNKSLAM SFSSPTSYLM 1140 K

Sequence ? help Back to Top

Protein Sequence Length: 1141 aa Download sequence

MDGEQSMPAP SHGHVDGAQK VRALHGRTTG PARRSTKGQW TLEEDDILRK AVQRFKGKNW  60
KKIGTECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IIELVKKNGP KKWSSIAQHL  120
PGRIGKQCRE RWCNHLDPTI KKEAWTQEEE LALIHFHQKH GNRWAELSKF ILNLLYQQAS  180
KVATYLCFCG NRTDNAIKNH WNSSVKKKLD SYLASGLLTR FESGPHVGNS NQPTRLQCRG  240
DDNGPKGTEG EEVSECSQGS ANAVCFPSAR GTSSADLPTG EAYRPKEECS LGKDHSVSRA  300
SCSEPYYVSI DDVTMCIPEI AYEEACTSQF IEQQSHEPGN SISGDCQFNL HSLPNISSMV  360
LGQESSQLQR DCIAPSEVCD MVNVPFQNSV ELGVSTSMGC ASMDSLKPEH MLISDDECCR  420
VLFSGATNDG CFPPVDYSKG EDMVEFSGCT SFLCQSCNIQ ISETGGTSTP QLTCPQCSDN  480
YKVTSSSQSV LPVLSASDDR LVPTANGNQL FRTDHQFVSG TPANFTYVND ISSSPCVDGI  540
GSAVAVLQEP HDTLEDTSKL VPVNSFGCGS DAKQTCNPID EETNVHAEQE DSGSLCYEPP  600
RFPSLDIPFF SCDLVQSGID MQQEFSPLGI RQFMMSSMNC LTPFRLWDSP SRDDSPDALL  660
KSAAKTFTGT PSILKKRHRD LLSPLSDKRI DKKLETDMTS TFTKKISSLD VMFGDNETRE  720
ADMPSSSLHK QNTSASVDDD NKENCEQAYK GASSSSLQKQ NNSASVDDDN KENCGQAYKG  780
ASSSSLQKQN TSSSVDDDNK ENCGQAYKGA SSLQKKNTSA FVDDDNKENC GQAYKGEQVD  840
EPIKSVILDE KKSQKDTVSN SQHNVKQLPL DSKMKSDATS AEIEQQPCEV LVEHDVNDMS  900
LSSPDQVGLK SDRGLGSSAK TPKSLNRSLE AAPNQSCHLK LSSENPRSKV NSPCVRPKEQ  960
ETLSIAIPRV QAPGDNSGDQ TRKDGGFETC SIFGGTPFRK GIESPSAWKS PWFFNTSLFS  1020
PREITIEDFG YLMSPGDRSY DAIGLLKQIS EQTAATYANA QEILGNETPK ALPKDACGND  1080
KDKDPENNDP PNQPGNHSQL ASNALIERRT LDFSECGTPG KSDNNKSLAM SFSSPTSYLM  1140
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-176	MYB family protein