PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY08427.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 284aa MW: 31407.9 Da PI: 7.1094

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY08427.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00046	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H RDY08427.1 105 FSCNYCKRKFFSSQALGGHQNAH 127 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MKQNFDLEVE ASAEYESEVS SQVASNISIK ETTAHPCGDI LTNSSNVTNP IELRLYSDAI 60 SLDLTLNFNN NDLVVRDSAG LSFSSTSESS NDPPSQTTSA NPRVFSCNYC KRKFFSSQAL 120 GGHQNAHKRE RTLAKRAMRM GFFSERSLGI KAHSSLHHGF SPTTRLPEMK SNARFEQGYI 180 GLPMFLEEDE AELWWQGSYH QVPTEGGHST HQNFRVSGSS NLSFVGVNPP VDIENSTTPD 240 RTCMQGNGAR LINVINKLAG AHVTFKNQNK ESKMVHIRLS VSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66140.1	9e-37	C2H2 family protein