PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY08328.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 297aa    MW: 34427.8 Da    PI: 6.1319
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY08328.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.47.6e-144087148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +l + +   G ++W+t+++  g+ R++k+c++rw +yl
       RDY08328.1 40 RGPWTIEEDHKLMNFILNNGIHCWRTVPKLAGLLRCGKSCRLRWINYL 87
                     89******************************99************97 PP
2Myb_DNA-binding52.21.4e-1693136146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg +T+ E+++ ++++  lG++ W++Ia++++ gRt++++k++w++
       RDY08328.1  93 RGGFTEMEEDQMIQLHSSLGNR-WSKIASHFP-GRTDNEIKNHWNT 136
                      788*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MNWQHLCFNL KLLFKCHASN VKRASKMGRQ PCCDKIGLKR GPWTIEEDHK LMNFILNNGI  60
HCWRTVPKLA GLLRCGKSCR LRWINYLRPD LKRGGFTEME EDQMIQLHSS LGNRWSKIAS  120
HFPGRTDNEI KNHWNTRIKK RLKLLGLDPV THMPIEQKEQ HTDEDTNKAN PHSVGSEENV  180
EIKSLDGDGT KEMTKTEGKR EENKVTWDET TELLNNFEML CSQLDLGSWM SQDTNTSATS  240
LCSSSVSLDD TSHLSMDESS CIQENYLQQW VDSMDSILSW DDFNPLDQET FFMENRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.17e-87MYB family protein