PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY08160.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 492aa MW: 54430.6 Da PI: 10.6687

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY08160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00041	91	113	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ Fs L H+r+H RDY08160.1 91 HECSICGMEFSLGQALGGHMRKH 113 78********************9 PP
2	zf-C2H2	13.5	0.00021	262	282	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cg+ Fsr L H+r+H RDY08160.1 262 CSICGMGFSRGQALGGHMRRH 282 ********************9 PP
3	zf-C2H2	11	0.0014	419	439	1	21
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 +kC++Cgk Fs L H++ RDY08160.1 419 HKCSICGKEFSLGQALGGHMN 439 79*********9999988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MVVAMKRQRE SESIESIDLA NSLILLSHAQ KKPLLKSLGQ AEFECKTCNR KFPSFQALGG 60 HRASHKKPKL EGEELKAEGK GLSLGNKGKM HECSICGMEF SLGQALGGHM RKHRSAVNAV 120 NAVNDNKQGF PSMKALPVLK RSNSKRVMCL ELDLNLTPLE NDLKLLFGNK APTINLSFSN 180 MKRQRENEAT TLESWDMRNC LMVAETSVSA STEVIECKTC NRVFSSFQAL GGHRASSHKR 240 AKLEGEKSLG LGIRSGPKMH LCSICGMGFS RGQALGGHMR RHRAATKEPF SSINQVVAKV 300 SVLKRSCIDK VFCFDLNLTP LQNDLNLFLF GKVSAKRVAM KRQRDGIIDL ANCLMLLSHP 360 RESKTQKLLG PVEFECRPCN RKFSSFQALG GHRASHKKPK VDGKEQGKIL RLGNKPKKHK 420 CSICGKEFSL GQALGGHMNK GFSSINQVVV QVSVLKRSIS TRIMRLDLNL TPLQNDLKLL 480 FGDKAPKIDS FP

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MVVAMKRQRE SESIESIDLA NSLILLSHAQ KKPLLKSLGQ AEFECKTCNR KFPSFQALGG  60
HRASHKKPKL EGEELKAEGK GLSLGNKGKM HECSICGMEF SLGQALGGHM RKHRSAVNAV  120
NAVNDNKQGF PSMKALPVLK RSNSKRVMCL ELDLNLTPLE NDLKLLFGNK APTINLSFSN  180
MKRQRENEAT TLESWDMRNC LMVAETSVSA STEVIECKTC NRVFSSFQAL GGHRASSHKR  240
AKLEGEKSLG LGIRSGPKMH LCSICGMGFS RGQALGGHMR RHRAATKEPF SSINQVVAKV  300
SVLKRSCIDK VFCFDLNLTP LQNDLNLFLF GKVSAKRVAM KRQRDGIIDL ANCLMLLSHP  360
RESKTQKLLG PVEFECRPCN RKFSSFQALG GHRASHKKPK VDGKEQGKIL RLGNKPKKHK  420
CSICGKEFSL GQALGGHMNK GFSSINQVVV QVSVLKRSIS TRIMRLDLNL TPLQNDLKLL  480
FGDKAPKIDS FP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	1e-35	C2H2 family protein