PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY08085.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 24913.9 Da PI: 9.0776 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.2 | 2.3e-19 | 122 | 171 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd++ ng r++lg++gtae+Aa a+++a+ k++g RDY08085.1 122 YRGVRRRP-WGKYAAEIRDVKRNG--MRVWLGTYGTAEDAALAYDRAAFKMRG 171 9*******.**********76676..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MSPHALNTNV NALDHFELPV TTSFQDASAS FPSTAAFSRS SSFRNIFFTE NWAELPLKED 60 DADDMVIYGA LHEAATTTGW FPTGGNGVSN VGVTVKMENE SQNSGNAAAR ETHAPPRKGW 120 NYRGVRRRPW GKYAAEIRDV KRNGMRVWLG TYGTAEDAAL AYDRAAFKMR GSKAKLNFPH 180 LIGSESVEPI KVTLKKRLSD VSLSCPSSST VPAKRRKDGC LADLELE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 195 | 217 | KKRLSDVSLSCPSSSTVPAKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 1e-43 | ERF family protein |