PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY07652.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 284aa MW: 31621.5 Da PI: 6.7109 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.3e-18 | 114 | 164 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr + +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+ +++g+ RDY07652.1 114 TYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAAIAIKGH 164 69****998.**********843...6**********************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
METSTHSFCT TPLIKVFQTM RKRINMESDD AEYNSSATSS SSTSTSTITT PSIFLDTNTT 60 TTSSTSSSST SCTKQHFKTP QNDSTTSQTS LQNEKDSKEC NKKRQRDNSN NHPTYRGVRM 120 RNWGKWVSEI REPRKKSRIW LGTYPTAEMA ARAHDVAAIA IKGHSAYLNF PQLAQKLPRP 180 ASTSPKDIQE AAAKAANTTF DVVKHCQSSK EEQEPNQASS STLSMDNTQE SSSSPSTNDD 240 DTLFDLPDLF PDGNHGLCSY SSSWHLCAVD SGFRLDESFF WENY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 1e-49 | ERF family protein |