PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY07506.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 478aa MW: 53857 Da PI: 8.3814

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY07506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.1	1.6e-13	297	340	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR++i++++++Lr+l+Pk +K++ a+iL Av+YIk+Lq RDY07506.1 297 VTERNRRNKIKKGLFTLRSLVPKI-----TKMDRAAILADAVDYIKELQ 340 57*******************7.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MSGLGVVEWL RPLVETKAWD YLVVWKYGDD PTRFIEWIGC CCRGSCSVNV DVLKPKEEAG 60 EVCHLAPICR DNHFQHPVRT KACEALAQLP FTLSLYSGLH GEVAISQQTR WLTQVDSIGT 120 QVLIPIVGGL IELFTEKLIP MDMNIIEFIT AHGCVSLKKE AISAQSHTTQ NINEHLPLRE 180 QYSQWWPLPM STLTPSVHQP AAKQCSSHPS IEGPSSGSNP STEEPSFDSK FVCLIPHEYQ 240 KQSVKISPIP KTKILKYNKT SGKQQRGLSS HCGNGEEDKS KLVKEPQKEC YQAKNLVTER 300 NRRNKIKKGL FTLRSLVPKI TKMDRAAILA DAVDYIKELQ TQVKELKDEV RALEVQDCEK 360 NTPQLRMPIG KEQEGTRSNP LNQSSSDCTK KTQMQVQAEV HHISKTDFLI KLFCEQKQGV 420 FSKLMEAIHS IGLRVASANM TTFDGKVLNI LTVEATKQDI HPKKLKEYLI QKTSDDRQ

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MSGLGVVEWL RPLVETKAWD YLVVWKYGDD PTRFIEWIGC CCRGSCSVNV DVLKPKEEAG  60
EVCHLAPICR DNHFQHPVRT KACEALAQLP FTLSLYSGLH GEVAISQQTR WLTQVDSIGT  120
QVLIPIVGGL IELFTEKLIP MDMNIIEFIT AHGCVSLKKE AISAQSHTTQ NINEHLPLRE  180
QYSQWWPLPM STLTPSVHQP AAKQCSSHPS IEGPSSGSNP STEEPSFDSK FVCLIPHEYQ  240
KQSVKISPIP KTKILKYNKT SGKQQRGLSS HCGNGEEDKS KLVKEPQKEC YQAKNLVTER  300
NRRNKIKKGL FTLRSLVPKI TKMDRAAILA DAVDYIKELQ TQVKELKDEV RALEVQDCEK  360
NTPQLRMPIG KEQEGTRSNP LNQSSSDCTK KTQMQVQAEV HHISKTDFLI KLFCEQKQGV  420
FSKLMEAIHS IGLRVASANM TTFDGKVLNI LTVEATKQDI HPKKLKEYLI QKTSDDRQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	301	308	NRRNKIKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	7e-73	bHLH family protein