PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY07095.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LSD

Protein Properties

Length: 217aa MW: 23486.2 Da PI: 8.2833

Description

LSD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY07095.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-LSD1	43.1	6.8e-14	54	78	1	25
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25 C+gCr++L YPrGA++V+CalC+t+ RDY07095.1 54 CNGCRNILVYPRGATNVCCALCNTI 78 ***********************97 PP
2	zf-LSD1	49.8	5.5e-16	93	117	1	25
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25 CggCrtlL+Y+rGA+sVRC++C+t+ RDY07095.1 93 CGGCRTLLMYTRGATSVRCSCCQTI 117 ***********************97 PP
3	zf-LSD1	46.1	7.7e-15	131	154	1	24
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdt 24 C +Crt+L+YP+GApsV+Ca+C+ RDY07095.1 131 CANCRTILMYPYGAPSVKCAICHY 154 9*********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
ILISTNNPID SSFQHSLSSF SESIAILHYT TSIHSEVKML LMCDFAVMRS QLVCNGCRNI 60 LVYPRGATNV CCALCNTITS VPPPGMEMSQ LYCGGCRTLL MYTRGATSVR CSCCQTINLV 120 PESNQVSHVH CANCRTILMY PYGAPSVKCA ICHYITNVSM TNGRLPIPVQ RPNGTANSGT 180 SMPHSQRQTV VVENPMSVDS SGKLVSNVVV GVTTDKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20380.2	8e-75	LSD family protein