PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY07002.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 323aa MW: 37008.2 Da PI: 7.9173

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY07002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.7e-17	27	74	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l ++++ +G g+W++ a++ g++Rt+k+c++rw++yl RDY07002.1 27 RGPWTLEEDNFLSQYIASHGEGRWNLLAKRSGLKRTGKSCRLRWLNYL 74 89********************************************97 PP
2	Myb_DNA-binding	54.7	2.4e-17	80	123	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ RDY07002.1 80 RGNLTPEEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 123 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MRGNNKPAMS SPKRVSSCSE DDNELRRGPW TLEEDNFLSQ YIASHGEGRW NLLAKRSGLK 60 RTGKSCRLRW LNYLKPDVKR GNLTPEEQLL ILELHSKWGN RWSKIAQHLP GRTDNEIKNY 120 WRTRIQKQAR HLKIDTDSRE FQELVRRSWM PRLLQKARES SSSSAMAIQN QAIPFPLDGV 180 SHHSTIGTIP SQTPWLNEAG PTYMDQHEQN SDSEHNNGSC ISFSESANIP KVSQHFGDTI 240 TQFHALNGND FGTFTCDGYH HHVNNNAYEM DTFKTPTARV AEGVQYPIGD CQMAGSNWVN 300 NDFACSGMWN IDDELWQFSK LQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25340.1	9e-79	MYB family protein