PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY06871.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 393aa MW: 44338.3 Da PI: 6.9513

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY06871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0016	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C +sF + L H+r+H RDY06871.1 4 HKCKLCLRSFANGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	13.8	0.00017	212	234	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F++ L H +H RDY06871.1 212 YKCETCDKVFRSYQALGGHRASH 234 9***********99999998887 PP
3	zf-C2H2	12.2	0.00054	262	284	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+++F + L H rtH RDY06871.1 262 HECPVCSRVFASGQALGGHKRTH 284 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MEKHKCKLCL RSFANGRALG GHMRSHMMNL PVPPKANEYA PVQLSFEAES SPSQSSSSFY 60 TLRENPKKSF RVADPEFSFA ADTGSVILQD RESETESSKK PTRRRSKRAW QLGCSPKKMK 120 LNKSESASSA SDTSEENVAF SLMMLSRDKW RKDKHYETEQ QQHKHYETEQ HQQHQFDDDD 180 EDDVVEVEEE EDSYASEEPK FPKKNNKVRG KYKCETCDKV FRSYQALGGH RASHKKVVIK 240 LNCENEGELE LEHAVVAEKK IHECPVCSRV FASGQALGGH KRTHVIGSAT TTTAIATLTD 300 SVRTSATASV RISTRVGNSF IDLNLPAPMD ENEDGSQFEN SAVSDAEFEV DQPTYFIDRK 360 VSSTSDTGIV HFRKKNMFGQ LVVNPLYHPS RDT

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MEKHKCKLCL RSFANGRALG GHMRSHMMNL PVPPKANEYA PVQLSFEAES SPSQSSSSFY  60
TLRENPKKSF RVADPEFSFA ADTGSVILQD RESETESSKK PTRRRSKRAW QLGCSPKKMK  120
LNKSESASSA SDTSEENVAF SLMMLSRDKW RKDKHYETEQ QQHKHYETEQ HQQHQFDDDD  180
EDDVVEVEEE EDSYASEEPK FPKKNNKVRG KYKCETCDKV FRSYQALGGH RASHKKVVIK  240
LNCENEGELE LEHAVVAEKK IHECPVCSRV FASGQALGGH KRTHVIGSAT TTTAIATLTD  300
SVRTSATASV RISTRVGNSF IDLNLPAPMD ENEDGSQFEN SAVSDAEFEV DQPTYFIDRK  360
VSSTSDTGIV HFRKKNMFGQ LVVNPLYHPS RDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	9e-51	C2H2 family protein