PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY06649.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 186aa MW: 21273.7 Da PI: 9.5198 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.7 | 2.1e-16 | 23 | 66 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT +Ede+l ++v+q+G++ W++Ia+++ gR++ +c+ rw k+l RDY06649.1 23 WTRDEDEKLRQLVQQHGPRKWNSIASKIE-GRSERSCRIRWVKHL 66 *****************************.***********9986 PP | |||||||
2 | Myb_DNA-binding | 58.6 | 1.4e-18 | 72 | 114 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + ++T eE+e+l+ a++++G++ W+tIa+ ++ gRt++ ++++w+ RDY06649.1 72 KSPFTDEEEERLLAAHELYGTR-WSTIAKLFP-GRTDNAVRNHWF 114 679*******************.*********.***********5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MAGISAADVD MANKYCPRVP HHWTRDEDEK LRQLVQQHGP RKWNSIASKI EGRSERSCRI 60 RWVKHLDPKV NKSPFTDEEE ERLLAAHELY GTRWSTIAKL FPGRTDNAVR NHWFIAKERK 120 RRNDSNNSSS SNSLPHAQPH EPLFGSRNVL ERSSSSSSLE KMSKDSGQKD IPLYDFLGVG 180 VSDDGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 4e-36 | MYB family protein |