PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY06332.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 357aa MW: 40439.8 Da PI: 5.1969 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.7 | 7.2e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT eEde+l +++ G g+W++ ++ g+ R++k+c++rw +yl RDY06332.1 14 KGRWTVEEDEILTNYILANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 6.1e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE+ +v++++ +G++ W++Ia++++ gRt++++k++w+++l RDY06332.1 67 RGNISVEEESTIVKLHASFGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 78999*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MGRAPCCDKV GLKKGRWTVE EDEILTNYIL ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SVEEESTIVK LHASFGNRWS LIASHLPGRT DNEIKNYWNS HLSRKVYTFR 120 GTSNKEIIPL PPKRKGGRTS RWAMKKNKNY VRTTPTQQSP KLIDTTHQNN NQALPLPALE 180 RENLDSKTEE QVDGSSTSTS TSAHPQEDTI TTTQEENVAG TMLVQCLVGE KEIKAPILGP 240 YEEEVLTFSD IMDDCWQVAS VDFTFFGAER ASNIDVGGNE KGDTCTNNMV RSEEDRESSV 300 NHGWNRESGE LHSSSSMALG LDDNWDWESV VQLDHNNESV SWEHHQNLLT WLWEDED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 4e-74 | MYB family protein |