PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY05648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | bHLH | ||||||||
Protein Properties | Length: 89aa MW: 10372.7 Da PI: 8.8168 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.1 | 1.4e-07 | 16 | 56 | 15 | 55 |
HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++N+ ++L+ llP+ + + ++ + s + iL++++ +I+ Lq RDY05648.1 16 EVNDLVSRLQVLLPQvN-QRSNSRQSASKILQETCCHIRRLQ 56 79*************66.999999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence |
MAGQRRSRAS KFTENEVNDL VSRLQVLLPQ VNQRSNSRQS ASKILQETCC HIRRLQKEVE 60 QLSERLSELM DSADISDIDR RTLQNFLQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47710.1 | 3e-19 | bHLH family protein |